In addition to this, we also provide hosted services for third party proprietary data. Hosted databases (SynaBASEs) are stored in a secure, restricted access environment. The MGRC Database Development Team continually reviews, updates and adds to its list of databases (SynaBASEs). MGRC currently hosts a wide variety of publicly available databases stored as SynaBASE pattern-based formats. A list of the current databases available on MGRC is shown below:
Nucleotide
SynaBASE of Sourced from * Version
Multi-Organisms Unigene Transcript NCBI NCBI Release April 2010 (NEW)
Microbial Refseq RNA NCBI Release 39 (updated)
Danio rerio (zebra fish) Genome NCBI Build 3.1
Danio rerio (zebra fish) RNA NCBI Build 3.1
Plant Repeat Database TIGR Release July 2008
Virus Genbank NCBI Release 176 (updated)
Plant Genbank NCBI Release 176 (updated)
Avian Influenza Virus NCBI Genbank Release 169
Homo sapiens (human) Genome NCBI Release 37.1
Homo sapiens (human) RNA NCBI Release 37.1
Mus musculus (mouse) Genome NCBI Release 37.1
Mus musculus (mouse) RNA NCBI Release 37.1
Microbial Refseq Genome NCBI Release 39 (updated)
Viral Refseq Genome NCBI Release 39 (updated)
Fungi Refseq Genome NCBI Release 39 (updated)
Fungi Refseq RNA NCBI Release 39 (updated)
Plant Refseq Genome NCBI Release 39 (updated)
Plant Refseq RNA NCBI Release 39 (updated)
Arabidopsis thaliana (thale cress) Genome TAIR Release 9.1 (updated)
Zea mays (corn) Assembled Sequences TIGR Maize Database Release 5.0
Oryza sativa (rice) Genome IRGSP Build 5.0
Eukaryotic Promoter Database EPD Release 100
Caenorhabditis elegans (worm) Genome Wormbase Release WS206
Papaya genome Carica ASGPB Draft assembly
Influenza Viral Sequence NCBI Release April 2010 (updated)
Dengue Viral Genome - -
Drosophila Melanogaster NCBI Release 5.2
 
Protein
SynaBASE of Sourced from * Version
NR BLAST Non Smotif NCBI Release Feb 2010 (updated)
Swiss-Prot UniProt Release 57.14 (updated)
 
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